miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|18208336|gb|AV912559.1|AV912559 AACTCTACTTACAACATAACCCAATTTATTATNATATACTCCCTCCGTCCGAAATTACTTGTCGCCGAAATTAATTAAAA
TAGATGTATCCAGAACTAAAATACATCTAGATACATCCATTCCTTCGACAAGTATTTTCAGACAAAGGGAGTAGTTACAG
ACATGCACAGTGATGAGGCACAGAAACTACAACAATAAAAAGTATGCCAAGACATTTATTCTTTATTTTTCTTATTGTTG
TATCAGCCCAGGTAACAAACTGGGAACGTGATGTAATGTCCAATACACACTACAGATAACACTTCCCTTGGAGGTCTTTT
GAATACCACATATGGCAGTTGGTCGAGCAGTAGCTGTGCCAGGTTCCGATTATATGCAGCGCCTCACATGCGTGACCTCG
TCGAAACTTGGTGAGCCGTCCGTGGCGCAGCCAGTGGTCGGCCGCTTTTCGCTCTTTCCTCCAAATACAATGATGGTTTG
AAGAAATCACCGTACATTTCAGCCCACTTGCTAAGCTTTGAATGTATATAAGATGCTCCCACCGTGTCAGCCCAAAAGAT
GAGGCCACCCCTGTACTTGGGAAAGCCCATCC




Most similar to sp|Q8W1L6|MFP_ORYSJ

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q8W1L6|MFP_ORYSJ Peroxisomal fatty acid beta-oxidation
           multifunctional protein OS=Oryza sativa subsp. japonica
           GN=MFP PE=1 SV=2
          Length = 726

 Score =  114 bits (284), Expect = 6e-25
 Identities = 50/68 (73%), Positives = 57/68 (83%)
 Frame = -3

Query: 590 MGFPKYRGGLIFWADTVGASYIHSKLSKWAEMYGDFFKPSLYLEERAKSGRPLAAPRTAH 411
           MGFPK+RGGL+FWADT+GA YIHSKLSKW E+YGDFFKPS YLE+RAK   PL+AP    
Sbjct: 659 MGFPKFRGGLVFWADTIGAPYIHSKLSKWTEIYGDFFKPSSYLEDRAKRSLPLSAPNATQ 718

Query: 410 QVSTRSRM 387
           Q S+RSRM
Sbjct: 719 QASSRSRM 726